Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 AL032819.2-201ENST00000624543 2162 ntBASIC17.77■□□□□ 0.44
CTSFQ9UBX1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 AC141586.3-201ENST00000562166 1838 ntBASIC17.77■□□□□ 0.44
CTSFQ9UBX1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 LINC01238-205ENST00000567549 1107 ntBASIC17.77■□□□□ 0.44
CTSFQ9UBX1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 AC140113.3-201ENST00000605663 199 ntBASIC17.77■□□□□ 0.44
CTSFQ9UBX1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 KRT8P3-201ENST00000519669 1449 ntBASIC17.77■□□□□ 0.44
CTSFQ9UBX1 AC036111.1-201ENST00000533973 1582 ntBASIC17.77■□□□□ 0.44
CTSFQ9UBX1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSFQ9UBX1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.77■□□□□ 0.43
CTSFQ9UBX1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 FAM8A6P-201ENST00000407496 1135 ntBASIC17.76■□□□□ 0.43
CTSFQ9UBX1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 AL031432.5-201ENST00000641059 760 ntBASIC17.76■□□□□ 0.43
CTSFQ9UBX1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSFQ9UBX1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.75■□□□□ 0.43
CTSFQ9UBX1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms