Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 FEM1AP3-201ENST00000403722 1741 ntBASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 AC036111.1-201ENST00000533973 1582 ntBASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 AC073130.3-201ENST00000624389 2278 ntBASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 IRX1P1-201ENST00000438849 1838 ntBASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 AL359075.1-203ENST00000462729 1002 ntBASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 MIR3180-5-201ENST00000583743 153 ntBASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCF1Q9UBD9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 AL031133.1-201ENST00000406807 723 ntBASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCF1Q9UBD9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 KRT18P38-201ENST00000449496 1282 ntBASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 GCSHP2-201ENST00000560971 527 ntBASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCF1Q9UBD9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms