Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CALCOCO1Q9P1Z2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.58■□□□□ 0.89
CALCOCO1Q9P1Z2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CALCOCO1Q9P1Z2 MTDHP1-201ENST00000605323 784 ntBASIC20.58■□□□□ 0.89
CALCOCO1Q9P1Z2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.58■□□□□ 0.89
CALCOCO1Q9P1Z2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.58■□□□□ 0.88
CALCOCO1Q9P1Z2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALCOCO1Q9P1Z2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALCOCO1Q9P1Z2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CALCOCO1Q9P1Z2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CALCOCO1Q9P1Z2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 SNORA78-201ENST00000459373 127 ntBASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALCOCO1Q9P1Z2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 TMEM179-206ENST00000616017 1645 ntBASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 AC011270.2-201ENST00000624293 2550 ntBASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 AL121829.2-201ENST00000620908 328 ntBASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CALCOCO1Q9P1Z2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 AP001271.2-201ENST00000624018 1556 ntBASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 AC068880.1-201ENST00000507289 2297 ntBASIC20.55■□□□□ 0.88
CALCOCO1Q9P1Z2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 AC104581.1-202ENST00000635932 2618 ntBASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 AL121906.2-201ENST00000621597 723 ntBASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 AC009113.1-201ENST00000570267 2443 ntBASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALCOCO1Q9P1Z2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms