Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM248Q9NWD8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 AC005363.2-201ENST00000618631 242 ntBASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM248Q9NWD8 AP000974.1-201ENST00000623909 2387 ntBASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM248Q9NWD8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 KRT8P45-201ENST00000414328 1447 ntBASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 AC113347.1-201ENST00000413321 391 ntBASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 AL512604.3-201ENST00000569583 964 ntBASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 WWOX-216ENST00000569818 525 ntBASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 CR769767.2-201ENST00000622735 460 ntBASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 AC008556.1-201ENST00000610908 2040 ntBASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM248Q9NWD8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 MIR3180-5-201ENST00000583743 153 ntBASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM248Q9NWD8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM248Q9NWD8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
TMEM248Q9NWD8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM248Q9NWD8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TMEM248Q9NWD8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
TMEM248Q9NWD8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM248Q9NWD8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM248Q9NWD8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms