Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS45Q9NRW7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VPS45Q9NRW7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS45Q9NRW7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.49■□□□□ 0.71
VPS45Q9NRW7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.48■□□□□ 0.71
VPS45Q9NRW7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 COX11P1-201ENST00000489116 835 ntBASIC19.48■□□□□ 0.71
VPS45Q9NRW7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 AL121956.5-201ENST00000625261 221 ntBASIC19.48■□□□□ 0.71
VPS45Q9NRW7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 AC018445.3-201ENST00000624177 1945 ntBASIC19.48■□□□□ 0.71
VPS45Q9NRW7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS45Q9NRW7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 LINC01465-201ENST00000408887 1940 ntBASIC19.47■□□□□ 0.71
VPS45Q9NRW7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 AC026396.1-201ENST00000419388 421 ntBASIC19.47■□□□□ 0.71
VPS45Q9NRW7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 AP000692.2-201ENST00000608391 879 ntBASIC19.47■□□□□ 0.71
VPS45Q9NRW7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS45Q9NRW7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 PCED1CP-201ENST00000419887 785 ntBASIC19.46■□□□□ 0.71
VPS45Q9NRW7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS45Q9NRW7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms