Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 PRORSD1P-201ENST00000295112 541 ntBASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 KRT16P5-201ENST00000455284 522 ntBASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTPS2Q9NRF8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTPS2Q9NRF8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 C1QL1P1-201ENST00000568105 661 ntBASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 WIZP1-201ENST00000531444 2299 ntBASIC17.58■□□□□ 0.4
CTPS2Q9NRF8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 ABHD17AP1-201ENST00000358206 933 ntBASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 AL359736.2-201ENST00000621992 437 ntBASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTPS2Q9NRF8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 AC018470.1-201ENST00000624790 3129 ntBASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 FAM197Y4-202ENST00000622692 608 ntBASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTPS2Q9NRF8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms