Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 SLC25A1P2-201ENST00000430693 912 ntBASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 IRX1P1-201ENST00000438849 1838 ntBASIC19.79■□□□□ 0.76
ARHGEF4Q9NR80 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 AIRN-201ENST00000601203 4374 ntBASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 BX664615.1-201ENST00000443558 458 ntBASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ARHGEF4Q9NR80 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARHGEF4Q9NR80 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF4Q9NR80 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF4Q9NR80 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF4Q9NR80 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ARHGEF4Q9NR80 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 TSPY21P-201ENST00000433481 731 ntBASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 TSPY23P-201ENST00000440136 739 ntBASIC19.76■□□□□ 0.75
ARHGEF4Q9NR80 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms