Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 AC083906.6-201ENST00000641366 219 ntBASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G1Q9HCP0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 FAM8A6P-201ENST00000407496 1135 ntBASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 AC140113.3-201ENST00000605663 199 ntBASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 AL590326.2-201ENST00000625139 305 ntBASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.74■□□□□ 0.75
CSNK1G1Q9HCP0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 AC022616.7-201ENST00000525383 220 ntBASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G1Q9HCP0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 GCSHP2-201ENST00000560971 527 ntBASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 HOXB1-202ENST00000577092 1414 ntBASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CSNK1G1Q9HCP0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 KRT8P7-201ENST00000533003 1432 ntBASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms