Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH9Q9HC56 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH9Q9HC56 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH9Q9HC56 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH9Q9HC56 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH9Q9HC56 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PCDH9Q9HC56 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH9Q9HC56 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 RPS2P55-201ENST00000397318 883 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 KSR1P1-201ENST00000446298 240 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 RPS2P4-201ENST00000476944 856 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 AC107956.1-201ENST00000494359 873 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 AL445675.2-201ENST00000620291 557 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 AP006294.2-201ENST00000641667 209 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.51■□□□□ 0.71
PCDH9Q9HC56 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH9Q9HC56 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 AL390961.4-201ENST00000623958 2535 ntBASIC19.5■□□□□ 0.71
PCDH9Q9HC56 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 AC012618.2-201ENST00000428058 849 ntBASIC19.5■□□□□ 0.71
PCDH9Q9HC56 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 AC008550.1-201ENST00000511500 884 ntBASIC19.5■□□□□ 0.71
PCDH9Q9HC56 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 AC073195.1-201ENST00000607241 877 ntBASIC19.5■□□□□ 0.71
PCDH9Q9HC56 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 BICD1-207ENST00000551848 1962 ntBASIC19.5■□□□□ 0.71
PCDH9Q9HC56 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH9Q9HC56 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH9Q9HC56 AC007613.1-201ENST00000572811 2597 ntBASIC19.49■□□□□ 0.71
PCDH9Q9HC56 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms