Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 BX276092.2-201ENST00000417668 665 ntBASIC23.19■■□□□ 1.3
UPF2Q9HAU5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 AC006557.6-201ENST00000623071 864 ntBASIC23.19■■□□□ 1.3
UPF2Q9HAU5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
UPF2Q9HAU5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 LTB4R2-202ENST00000528054 3092 ntBASIC23.18■■□□□ 1.3
UPF2Q9HAU5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
UPF2Q9HAU5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 AC073592.3-201ENST00000625118 1834 ntBASIC23.17■■□□□ 1.3
UPF2Q9HAU5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UPF2Q9HAU5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
UPF2Q9HAU5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 TUBB8P6-201ENST00000436895 1288 ntBASIC23.15■■□□□ 1.3
UPF2Q9HAU5 KRT18P16-201ENST00000510337 1294 ntBASIC23.15■■□□□ 1.3
UPF2Q9HAU5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UPF2Q9HAU5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
UPF2Q9HAU5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
UPF2Q9HAU5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
UPF2Q9HAU5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms