Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GSX1Q9H4S2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GSX1Q9H4S2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.03■□□□□ 0.16
GSX1Q9H4S2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 STARP1-201ENST00000397973 869 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 SPDYE15P-201ENST00000424157 909 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 TSSC2-201ENST00000450217 709 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 MIR3180-1-201ENST00000580374 94 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 MIR3180-3-201ENST00000584616 94 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 AL732292.2-201ENST00000609649 430 ntBASIC16.02■□□□□ 0.16
GSX1Q9H4S2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GSX1Q9H4S2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.02■□□□□ 0.15
GSX1Q9H4S2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GSX1Q9H4S2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 KRT18P13-201ENST00000400056 1290 ntBASIC16■□□□□ 0.15
GSX1Q9H4S2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16■□□□□ 0.15
GSX1Q9H4S2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
GSX1Q9H4S2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16■□□□□ 0.15
GSX1Q9H4S2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms