Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 KRT8P41-201ENST00000533985 1514 ntBASIC17.52■□□□□ 0.39
UBQLN3Q9H347 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.52■□□□□ 0.39
UBQLN3Q9H347 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.51■□□□□ 0.39
UBQLN3Q9H347 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 AC096733.2-201ENST00000609937 1394 ntBASIC17.5■□□□□ 0.39
UBQLN3Q9H347 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN3Q9H347 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 AC104417.2-201ENST00000562989 1793 ntBASIC17.49■□□□□ 0.39
UBQLN3Q9H347 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 FAM207BP-201ENST00000447172 505 ntBASIC17.49■□□□□ 0.39
UBQLN3Q9H347 AC097488.1-201ENST00000507834 756 ntBASIC17.49■□□□□ 0.39
UBQLN3Q9H347 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 CYP2D8P-201ENST00000433633 1490 ntBASIC17.49■□□□□ 0.39
UBQLN3Q9H347 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN3Q9H347 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.48■□□□□ 0.39
UBQLN3Q9H347 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms