Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 TUBB8P6-201ENST00000436895 1288 ntBASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 BICD1-207ENST00000551848 1962 ntBASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD3Q9BV44 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 SOX15-203ENST00000570788 1093 ntBASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD3Q9BV44 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 KRT18P16-201ENST00000510337 1294 ntBASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 RNA5SP413-201ENST00000516373 109 ntBASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THUMPD3Q9BV44 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 ANO7L1-203ENST00000602586 1720 ntBASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms