Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 AC138932.1-201ENST00000534164 6830 ntBASIC18.06■□□□□ 0.48
CMKLR1Q99788 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 AL645929.1-201ENST00000420084 975 ntBASIC18.05■□□□□ 0.48
CMKLR1Q99788 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 GPAT2P1-201ENST00000444924 1672 ntBASIC18.05■□□□□ 0.48
CMKLR1Q99788 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.05■□□□□ 0.48
CMKLR1Q99788 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMKLR1Q99788 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.04■□□□□ 0.48
CMKLR1Q99788 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 SDHAP1-207ENST00000440850 2000 ntBASIC18.04■□□□□ 0.48
CMKLR1Q99788 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMKLR1Q99788 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.04■□□□□ 0.48
CMKLR1Q99788 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 MCCD1P1-208ENST00000445732 328 ntBASIC18.03■□□□□ 0.48
CMKLR1Q99788 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 AC024243.1-201ENST00000609234 778 ntBASIC18.03■□□□□ 0.48
CMKLR1Q99788 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CMKLR1Q99788 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMKLR1Q99788 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms