Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.33■□□□□ 0.36
TIMP4Q99727 AC005521.1-201ENST00000393351 872 ntBASIC17.33■□□□□ 0.36
TIMP4Q99727 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.33■□□□□ 0.36
TIMP4Q99727 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.33■□□□□ 0.36
TIMP4Q99727 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TIMP4Q99727 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
TIMP4Q99727 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP4Q99727 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 KRT8P41-201ENST00000533985 1514 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP4Q99727 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP4Q99727 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TIMP4Q99727 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TIMP4Q99727 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TIMP4Q99727 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TIMP4Q99727 AC113347.1-201ENST00000413321 391 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 TMPOP1-202ENST00000424642 1267 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 AC128688.1-201ENST00000487626 519 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP4Q99727 RN7SL850P-201ENST00000579959 291 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP4Q99727 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP4Q99727 AC092865.7-201ENST00000641832 219 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TIMP4Q99727 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP4Q99727 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP4Q99727 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 AC005082.1-201ENST00000413042 2259 ntBASIC17.32■□□□□ 0.36
TIMP4Q99727 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
TIMP4Q99727 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP4Q99727 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP4Q99727 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP4Q99727 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMP4Q99727 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMP4Q99727 AC141586.3-201ENST00000562166 1838 ntBASIC17.31■□□□□ 0.36
TIMP4Q99727 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
TIMP4Q99727 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TIMP4Q99727 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.31■□□□□ 0.36
TIMP4Q99727 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMP4Q99727 SLC25A3P1-201ENST00000443844 931 ntBASIC17.31■□□□□ 0.36
TIMP4Q99727 ECEL1P2-202ENST00000465689 757 ntBASIC17.31■□□□□ 0.36
TIMP4Q99727 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TIMP4Q99727 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TIMP4Q99727 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TIMP4Q99727 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP4Q99727 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TIMP4Q99727 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP4Q99727 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP4Q99727 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TIMP4Q99727 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TIMP4Q99727 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP4Q99727 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP4Q99727 AL137013.1-201ENST00000432946 1228 ntBASIC17.3■□□□□ 0.36
TIMP4Q99727 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.3■□□□□ 0.36
TIMP4Q99727 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TIMP4Q99727 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
TIMP4Q99727 AC010331.1-201ENST00000611423 582 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms