Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 TSPY5P-201ENST00000426936 936 ntBASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 AC063952.2-201ENST00000498792 1227 ntBASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK5RAP1Q96SZ6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 HOMER2P1-201ENST00000455653 964 ntBASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 AC092647.4-201ENST00000457211 535 ntBASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 RCC2P3-201ENST00000418112 1537 ntBASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 KRT8P32-201ENST00000512863 1461 ntBASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5RAP1Q96SZ6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 AC022616.7-201ENST00000525383 220 ntBASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP1Q96SZ6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.58■□□□□ 0.73
CDK5RAP1Q96SZ6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP1Q96SZ6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP1Q96SZ6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP1Q96SZ6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CDK5RAP1Q96SZ6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP1Q96SZ6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 AC011558.1-201ENST00000623459 338 ntBASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 AC007952.6-201ENST00000573168 2673 ntBASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 AC003957.1-201ENST00000625108 2673 ntBASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP1Q96SZ6 AC036111.1-201ENST00000533973 1582 ntBASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 AC005332.7-201ENST00000614046 2005 ntBASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 KRT8P7-201ENST00000533003 1432 ntBASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms