Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BBS4Q96RK4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BBS4Q96RK4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BBS4Q96RK4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BBS4Q96RK4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BBS4Q96RK4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 GCSHP5-201ENST00000443090 522 ntBASIC17.91■□□□□ 0.46
BBS4Q96RK4 UBE2SP1-201ENST00000450587 669 ntBASIC17.91■□□□□ 0.46
BBS4Q96RK4 AC098590.1-201ENST00000468126 897 ntBASIC17.91■□□□□ 0.46
BBS4Q96RK4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.91■□□□□ 0.46
BBS4Q96RK4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 RCC2P6-201ENST00000526625 1557 ntBASIC17.91■□□□□ 0.46
BBS4Q96RK4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
BBS4Q96RK4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
BBS4Q96RK4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 AC091390.4-202ENST00000476426 537 ntBASIC17.9■□□□□ 0.46
BBS4Q96RK4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 AC026271.3-201ENST00000571884 352 ntBASIC17.9■□□□□ 0.46
BBS4Q96RK4 AC011298.2-201ENST00000617989 482 ntBASIC17.9■□□□□ 0.46
BBS4Q96RK4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
BBS4Q96RK4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BBS4Q96RK4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
BBS4Q96RK4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BBS4Q96RK4 KRT8P11-201ENST00000409686 1436 ntBASIC17.89■□□□□ 0.46
BBS4Q96RK4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
BBS4Q96RK4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BBS4Q96RK4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.89■□□□□ 0.45
BBS4Q96RK4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BBS4Q96RK4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms