Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NEK1Q96PY6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
NEK1Q96PY6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 HEIH-201ENST00000623091 1652 ntBASIC22.36■■□□□ 1.17
NEK1Q96PY6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 KRT8P32-201ENST00000512863 1461 ntBASIC22.36■■□□□ 1.17
NEK1Q96PY6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 MFAP1P1-201ENST00000442257 1255 ntBASIC22.36■■□□□ 1.17
NEK1Q96PY6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.36■■□□□ 1.17
NEK1Q96PY6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NEK1Q96PY6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NEK1Q96PY6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
NEK1Q96PY6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NEK1Q96PY6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NEK1Q96PY6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 AL596275.1-201ENST00000423464 877 ntBASIC22.35■■□□□ 1.17
NEK1Q96PY6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 AC068587.9-201ENST00000641814 219 ntBASIC22.35■■□□□ 1.17
NEK1Q96PY6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
NEK1Q96PY6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NEK1Q96PY6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
NEK1Q96PY6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NEK1Q96PY6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
NEK1Q96PY6 SNORA78-201ENST00000459373 127 ntBASIC22.33■■□□□ 1.17
NEK1Q96PY6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NEK1Q96PY6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NEK1Q96PY6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NEK1Q96PY6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.33■■□□□ 1.17
NEK1Q96PY6 ANO7L1-203ENST00000602586 1720 ntBASIC22.33■■□□□ 1.17
NEK1Q96PY6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.33■■□□□ 1.17
NEK1Q96PY6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
NEK1Q96PY6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.33■■□□□ 1.16
NEK1Q96PY6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NEK1Q96PY6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
NEK1Q96PY6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NEK1Q96PY6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 CRYGFP-201ENST00000418459 633 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms