Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
CFAP54Q96N23 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.52■□□□□ 0.56
CFAP54Q96N23 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CFAP54Q96N23 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CFAP54Q96N23 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.52■□□□□ 0.55
CFAP54Q96N23 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.52■□□□□ 0.55
CFAP54Q96N23 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.52■□□□□ 0.55
CFAP54Q96N23 AC004832.2-201ENST00000426397 482 ntBASIC18.52■□□□□ 0.55
CFAP54Q96N23 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.52■□□□□ 0.55
CFAP54Q96N23 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CFAP54Q96N23 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.52■□□□□ 0.55
CFAP54Q96N23 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CFAP54Q96N23 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CFAP54Q96N23 NSUN5P1-202ENST00000421140 1535 ntBASIC18.52■□□□□ 0.55
CFAP54Q96N23 NSUN5P2-203ENST00000457352 1529 ntBASIC18.52■□□□□ 0.55
CFAP54Q96N23 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CFAP54Q96N23 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.51■□□□□ 0.55
CFAP54Q96N23 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CFAP54Q96N23 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CFAP54Q96N23 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CFAP54Q96N23 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CFAP54Q96N23 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 FAM215A-202ENST00000632077 792 ntBASIC18.5■□□□□ 0.55
CFAP54Q96N23 AL391807.1-203ENST00000604392 2365 ntBASIC18.5■□□□□ 0.55
CFAP54Q96N23 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CFAP54Q96N23 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 AL096865.1-201ENST00000606796 927 ntBASIC18.5■□□□□ 0.55
CFAP54Q96N23 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CFAP54Q96N23 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CFAP54Q96N23 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.5■□□□□ 0.55
CFAP54Q96N23 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 AL645939.2-201ENST00000427340 991 ntBASIC18.49■□□□□ 0.55
CFAP54Q96N23 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.49■□□□□ 0.55
CFAP54Q96N23 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFAP54Q96N23 AC007225.1-201ENST00000566331 1836 ntBASIC18.49■□□□□ 0.55
CFAP54Q96N23 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 AC190387.1-201ENST00000551683 408 ntBASIC18.48■□□□□ 0.55
CFAP54Q96N23 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFAP54Q96N23 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.48■□□□□ 0.55
CFAP54Q96N23 AC106028.4-201ENST00000614509 607 ntBASIC18.48■□□□□ 0.55
CFAP54Q96N23 AL049796.1-201ENST00000565336 1766 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms