Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18■□□□□ 0.47
ITCHQ96J02 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18■□□□□ 0.47
ITCHQ96J02 POM121L13P-201ENST00000422362 380 ntBASIC18■□□□□ 0.47
ITCHQ96J02 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18■□□□□ 0.47
ITCHQ96J02 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ITCHQ96J02 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
ITCHQ96J02 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ITCHQ96J02 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ITCHQ96J02 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.99■□□□□ 0.47
ITCHQ96J02 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 AC069152.1-201ENST00000438030 544 ntBASIC17.99■□□□□ 0.47
ITCHQ96J02 TSPY23P-201ENST00000440136 739 ntBASIC17.99■□□□□ 0.47
ITCHQ96J02 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.99■□□□□ 0.47
ITCHQ96J02 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 NBPF21P-201ENST00000425093 1451 ntBASIC17.99■□□□□ 0.47
ITCHQ96J02 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ITCHQ96J02 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
ITCHQ96J02 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.99■□□□□ 0.47
ITCHQ96J02 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ITCHQ96J02 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ITCHQ96J02 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.98■□□□□ 0.47
ITCHQ96J02 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 C1QL1P1-201ENST00000568105 661 ntBASIC17.98■□□□□ 0.47
ITCHQ96J02 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 AL109923.1-201ENST00000618799 583 ntBASIC17.98■□□□□ 0.47
ITCHQ96J02 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.98■□□□□ 0.47
ITCHQ96J02 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ITCHQ96J02 HLA-A-209ENST00000638375 975 ntBASIC17.98■□□□□ 0.47
ITCHQ96J02 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITCHQ96J02 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.98■□□□□ 0.47
ITCHQ96J02 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms