Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 AC008556.1-201ENST00000610908 2040 ntBASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 NEK4P2-201ENST00000580004 1012 ntBASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ECHDC3Q96DC8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 AC104076.2-201ENST00000448912 469 ntBASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 AC036111.1-201ENST00000533973 1582 ntBASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 HEIH-201ENST00000623091 1652 ntBASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 AC083906.6-201ENST00000641366 219 ntBASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.87■□□□□ 0.61
ECHDC3Q96DC8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 AC117947.1-201ENST00000427448 529 ntBASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 AC009947.2-201ENST00000444014 672 ntBASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms