Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.32■□□□□ 0.84
SEMA4DQ92854 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.32■□□□□ 0.84
SEMA4DQ92854 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA4DQ92854 MTMR9LP-203ENST00000426597 1545 ntBASIC20.32■□□□□ 0.84
SEMA4DQ92854 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4DQ92854 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.32■□□□□ 0.84
SEMA4DQ92854 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.31■□□□□ 0.84
SEMA4DQ92854 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4DQ92854 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4DQ92854 CYP2D8P-201ENST00000433633 1490 ntBASIC20.3■□□□□ 0.84
SEMA4DQ92854 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SEMA4DQ92854 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA4DQ92854 AC120498.9-201ENST00000339021 3867 ntBASIC20.3■□□□□ 0.84
SEMA4DQ92854 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
SEMA4DQ92854 AL023803.3-201ENST00000615559 522 ntBASIC20.3■□□□□ 0.84
SEMA4DQ92854 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SEMA4DQ92854 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA4DQ92854 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA4DQ92854 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA4DQ92854 AL138781.2-201ENST00000617896 1843 ntBASIC20.3■□□□□ 0.84
SEMA4DQ92854 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 RCC2P3-201ENST00000418112 1537 ntBASIC20.29■□□□□ 0.84
SEMA4DQ92854 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 MIR4674-201ENST00000582457 87 ntBASIC20.29■□□□□ 0.84
SEMA4DQ92854 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA4DQ92854 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA4DQ92854 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 INGX-201ENST00000359239 846 ntBASIC20.28■□□□□ 0.84
SEMA4DQ92854 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 CA15P1-201ENST00000481698 905 ntBASIC20.28■□□□□ 0.84
SEMA4DQ92854 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms