Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 AL355355.2-201ENST00000442321 338 ntBASIC20.13■□□□□ 0.81
DDX1Q92499 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 NUDT16P1-203ENST00000513809 620 ntBASIC20.13■□□□□ 0.81
DDX1Q92499 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.13■□□□□ 0.81
DDX1Q92499 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX1Q92499 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX1Q92499 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX1Q92499 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
DDX1Q92499 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX1Q92499 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
DDX1Q92499 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DDX1Q92499 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
DDX1Q92499 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX1Q92499 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX1Q92499 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX1Q92499 AP003071.4-201ENST00000562276 1284 ntBASIC20.12■□□□□ 0.81
DDX1Q92499 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.12■□□□□ 0.81
DDX1Q92499 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX1Q92499 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX1Q92499 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX1Q92499 AC068587.9-201ENST00000641814 219 ntBASIC20.12■□□□□ 0.81
DDX1Q92499 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX1Q92499 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
DDX1Q92499 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX1Q92499 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 HEIH-201ENST00000623091 1652 ntBASIC20.12■□□□□ 0.81
DDX1Q92499 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX1Q92499 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
DDX1Q92499 KRT8P32-201ENST00000512863 1461 ntBASIC20.11■□□□□ 0.81
DDX1Q92499 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
DDX1Q92499 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX1Q92499 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
DDX1Q92499 ANO7L1-203ENST00000602586 1720 ntBASIC20.11■□□□□ 0.81
DDX1Q92499 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.11■□□□□ 0.81
DDX1Q92499 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX1Q92499 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
DDX1Q92499 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.11■□□□□ 0.81
DDX1Q92499 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX1Q92499 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX1Q92499 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
DDX1Q92499 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX1Q92499 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX1Q92499 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX1Q92499 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX1Q92499 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
DDX1Q92499 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
DDX1Q92499 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.11■□□□□ 0.81
DDX1Q92499 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX1Q92499 WIZP1-201ENST00000531444 2299 ntBASIC20.1■□□□□ 0.81
DDX1Q92499 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX1Q92499 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
DDX1Q92499 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
DDX1Q92499 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 MTMR9LP-203ENST00000426597 1545 ntBASIC20.1■□□□□ 0.81
DDX1Q92499 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX1Q92499 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX1Q92499 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX1Q92499 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.1■□□□□ 0.81
DDX1Q92499 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX1Q92499 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 AC096733.2-201ENST00000609937 1394 ntBASIC20.09■□□□□ 0.81
DDX1Q92499 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms