Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 AC026366.1-201ENST00000488803 879 ntBASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 AP006587.1-201ENST00000534129 1502 ntBASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 PCDHB18P-201ENST00000524813 2368 ntBASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 SDHAP1-207ENST00000440850 2000 ntBASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN4IP1Q8WWV3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 NOC2LP1-202ENST00000452600 2235 ntBASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 KRT17P3-201ENST00000420566 1262 ntBASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RTN4IP1Q8WWV3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RTN4IP1Q8WWV3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.88■□□□□ 0.13
RTN4IP1Q8WWV3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RTN4IP1Q8WWV3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RTN4IP1Q8WWV3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms