Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH3RF2Q8TEC5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.58■□□□□ 0.73
SH3RF2Q8TEC5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH3RF2Q8TEC5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH3RF2Q8TEC5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH3RF2Q8TEC5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.58■□□□□ 0.73
SH3RF2Q8TEC5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 STARP1-201ENST00000397973 869 ntBASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 AC112907.2-201ENST00000448639 330 ntBASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SH3RF2Q8TEC5 IER3-202ENST00000376377 1350 ntBASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 SPDYE15P-201ENST00000424157 909 ntBASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 AC036111.1-201ENST00000533973 1582 ntBASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH3RF2Q8TEC5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 AC005332.1-201ENST00000577698 1310 ntBASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 KRT8P3-201ENST00000519669 1449 ntBASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SH3RF2Q8TEC5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 MCCD1P1-208ENST00000445732 328 ntBASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.55■□□□□ 0.72
SH3RF2Q8TEC5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms