Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 AC112907.2-201ENST00000448639 330 ntBASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 AC083849.1-201ENST00000615227 514 ntBASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 HYMAI.1-201ENST00000620949 238 ntBASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 AC116407.4-201ENST00000623319 1061 ntBASIC19.83■□□□□ 0.77
SHKBP1Q8TBC3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHKBP1Q8TBC3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 AC018445.3-201ENST00000624177 1945 ntBASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 STARP1-201ENST00000397973 869 ntBASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHKBP1Q8TBC3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 SPDYE15P-201ENST00000424157 909 ntBASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 KRT18P56-201ENST00000507275 550 ntBASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.81■□□□□ 0.76
SHKBP1Q8TBC3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SHKBP1Q8TBC3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms