Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 KRT8P11-201ENST00000409686 1436 ntBASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.14■■□□□ 1.13
SMARCC2Q8TAQ2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC2Q8TAQ2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 AC211429.1-201ENST00000415277 523 ntBASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 AL390955.1-201ENST00000428694 934 ntBASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 AC130371.2-201ENST00000619443 611 ntBASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 AC133561.5-201ENST00000635547 218 ntBASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC2Q8TAQ2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 ECEL1P3-201ENST00000427961 737 ntBASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 DGCR10-201ENST00000609839 495 ntBASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC2Q8TAQ2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 FITM1-202ENST00000559294 800 ntBASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms