Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 KRT18P6-201ENST00000555540 1265 ntBASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLHC1Q8NHS4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLHC1Q8NHS4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.14■□□□□ 0.5
CLHC1Q8NHS4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CLHC1Q8NHS4 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.5
CLHC1Q8NHS4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
CLHC1Q8NHS4 AC018470.1-201ENST00000624790 3129 ntBASIC18.14■□□□□ 0.5
CLHC1Q8NHS4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 TSPY21P-201ENST00000433481 731 ntBASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ANO7L1-203ENST00000602586 1720 ntBASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLHC1Q8NHS4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 AC083906.6-201ENST00000641366 219 ntBASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.13■□□□□ 0.49
CLHC1Q8NHS4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms