Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RTL9Q8NET4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTL9Q8NET4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RTL9Q8NET4 ATP5G2P1-201ENST00000433580 426 ntBASIC23.27■■□□□ 1.31
RTL9Q8NET4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.27■■□□□ 1.31
RTL9Q8NET4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.27■■□□□ 1.31
RTL9Q8NET4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.27■■□□□ 1.31
RTL9Q8NET4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.27■■□□□ 1.31
RTL9Q8NET4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RTL9Q8NET4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RTL9Q8NET4 NPAP1P7-201ENST00000613027 823 ntBASIC23.27■■□□□ 1.31
RTL9Q8NET4 AC079602.3-201ENST00000623931 403 ntBASIC23.27■■□□□ 1.31
RTL9Q8NET4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.27■■□□□ 1.31
RTL9Q8NET4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTL9Q8NET4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.26■■□□□ 1.31
RTL9Q8NET4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.26■■□□□ 1.31
RTL9Q8NET4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 FP475955.4-201ENST00000623131 1990 ntBASIC23.25■■□□□ 1.31
RTL9Q8NET4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 AC008556.1-201ENST00000610908 2040 ntBASIC23.25■■□□□ 1.31
RTL9Q8NET4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 AL157888.1-201ENST00000631930 593 ntBASIC23.25■■□□□ 1.31
RTL9Q8NET4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL9Q8NET4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL9Q8NET4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RTL9Q8NET4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL9Q8NET4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RTL9Q8NET4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL9Q8NET4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms