Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 MIR6786-201ENST00000616843 113 ntBASIC17.81■□□□□ 0.44
PSD4Q8NDX1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.8■□□□□ 0.44
PSD4Q8NDX1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSD4Q8NDX1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 MESTP1-201ENST00000404287 994 ntBASIC17.79■□□□□ 0.44
PSD4Q8NDX1 MIR1238-201ENST00000408483 83 ntBASIC17.79■□□□□ 0.44
PSD4Q8NDX1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.79■□□□□ 0.44
PSD4Q8NDX1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSD4Q8NDX1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PSD4Q8NDX1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms