Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 STARP1-201ENST00000397973 869 ntBASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 LINC01311-201ENST00000565162 1445 ntBASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 ZNF444P1-201ENST00000559497 298 ntBASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 HYMAI.1-201ENST00000620949 238 ntBASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCBTB1Q8NDN9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 AL136038.3-201ENST00000561909 1096 ntBASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 AC036111.1-201ENST00000533973 1582 ntBASIC18.13■□□□□ 0.49
RCBTB1Q8NDN9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 AC069148.1-201ENST00000608741 768 ntBASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCBTB1Q8NDN9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms