Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 PENK-208ENST00000523051 772 ntTSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 PNN-202ENST00000553331 656 ntTSL 3 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 KRT18P31-201ENST00000506277 1292 ntBASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP43Q8NDM7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC29.54■■■□□ 2.32
CFAP43Q8NDM7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 BX640515.1-201ENST00000617215 977 ntBASIC29.53■■■□□ 2.32
CFAP43Q8NDM7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 TOB2P1-201ENST00000469761 992 ntBASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 AL121912.1-201ENST00000603683 238 ntBASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 KRT8P3-201ENST00000519669 1449 ntBASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP43Q8NDM7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
CFAP43Q8NDM7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 AL121772.3-201ENST00000610840 674 ntBASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP43Q8NDM7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 LINC00265-3P-201ENST00000447588 903 ntBASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 MIR3180-5-201ENST00000583743 153 ntBASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC29.5■■■□□ 2.31
CFAP43Q8NDM7 KRT18P13-201ENST00000400056 1290 ntBASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms