Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 KRT18P56-201ENST00000507275 550 ntBASIC20.56■□□□□ 0.88
RNF169Q8NCN4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 Z82202.1-201ENST00000623446 1880 ntBASIC20.56■□□□□ 0.88
RNF169Q8NCN4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF169Q8NCN4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 AC036111.1-201ENST00000533973 1582 ntBASIC20.55■□□□□ 0.88
RNF169Q8NCN4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 LINC01311-201ENST00000565162 1445 ntBASIC20.55■□□□□ 0.88
RNF169Q8NCN4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 AC138932.1-201ENST00000534164 6830 ntBASIC20.55■□□□□ 0.88
RNF169Q8NCN4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 SPDYE15P-201ENST00000424157 909 ntBASIC20.55■□□□□ 0.88
RNF169Q8NCN4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF169Q8NCN4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.54■□□□□ 0.88
RNF169Q8NCN4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF169Q8NCN4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 STARP1-201ENST00000397973 869 ntBASIC20.53■□□□□ 0.88
RNF169Q8NCN4 AL023284.2-201ENST00000405850 579 ntBASIC20.53■□□□□ 0.88
RNF169Q8NCN4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 ZNF444P1-201ENST00000559497 298 ntBASIC20.53■□□□□ 0.88
RNF169Q8NCN4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RNF169Q8NCN4 AC024243.1-201ENST00000609234 778 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms