Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
ARHGEF28Q8N1W1 PVRIG2P-201ENST00000435460 978 ntBASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 BX276092.5-203ENST00000456199 560 ntBASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 IFNL4P1-201ENST00000607083 540 ntBASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF28Q8N1W1 FEM1AP3-201ENST00000403722 1741 ntBASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 KRT8P7-201ENST00000533003 1432 ntBASIC26.18■■□□□ 1.78
ARHGEF28Q8N1W1 HEIH-201ENST00000623091 1652 ntBASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 MIR662-201ENST00000384847 95 ntBASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 KRT8P26-201ENST00000534154 1276 ntBASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC26.17■■□□□ 1.78
ARHGEF28Q8N1W1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 TSSC2-201ENST00000450217 709 ntBASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 AC034236.2-201ENST00000606662 1610 ntBASIC26.16■■□□□ 1.78
ARHGEF28Q8N1W1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 PRELID1P1-202ENST00000567272 903 ntBASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
ARHGEF28Q8N1W1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC26.14■■□□□ 1.78
ARHGEF28Q8N1W1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC26.14■■□□□ 1.78
ARHGEF28Q8N1W1 AP002414.4-201ENST00000589764 1148 ntBASIC26.14■■□□□ 1.78
ARHGEF28Q8N1W1 GPR32P1-201ENST00000601788 811 ntBASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms