Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 FOSL1P1-201ENST00000511041 816 ntBASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 AC120114.3-201ENST00000611923 658 ntBASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 KRT8P7-201ENST00000533003 1432 ntBASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL27A1Q8IZC6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 HLA-A-201ENST00000376802 1334 ntBASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 IGHV3-47-201ENST00000425060 335 ntBASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL27A1Q8IZC6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 AC099336.1-202ENST00000602961 463 ntBASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.78■□□□□ 0.44
COL27A1Q8IZC6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL27A1Q8IZC6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL27A1Q8IZC6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL27A1Q8IZC6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms