Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 AC116562.2-201ENST00000507042 360 ntBASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 AP006294.2-201ENST00000641667 209 ntBASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC116Q8IYX3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 AL355355.2-201ENST00000442321 338 ntBASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 CKBP1-201ENST00000565489 1086 ntBASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 AP000692.2-201ENST00000608391 879 ntBASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC116Q8IYX3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 MIR718-201ENST00000390190 70 ntBASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 AC026471.5-201ENST00000615068 467 ntBASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CCDC116Q8IYX3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC116Q8IYX3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms