Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRTAP1-3Q8IUG1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 RCC2P3-201ENST00000418112 1537 ntBASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 BX842568.4-201ENST00000421222 227 ntBASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 AC018712.1-201ENST00000455767 687 ntBASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 BNIP3P18-201ENST00000593976 575 ntBASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.54■□□□□ 0.08
KRTAP1-3Q8IUG1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 PMS2P7-201ENST00000506558 1336 ntBASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 GUSBP12-201ENST00000513727 720 ntBASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRTAP1-3Q8IUG1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 AF186996.4-201ENST00000467186 377 ntBASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 VENTXP7-201ENST00000475503 772 ntBASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRTAP1-3Q8IUG1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
KRTAP1-3Q8IUG1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRTAP1-3Q8IUG1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRTAP1-3Q8IUG1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 AL512353.2-201ENST00000448759 1962 ntBASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.51■□□□□ 0.07
KRTAP1-3Q8IUG1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms