Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 NEFHP1-201ENST00000412845 2629 ntBASIC18.02■□□□□ 0.48
RAB43Q86YS6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 INGX-201ENST00000359239 846 ntBASIC18.02■□□□□ 0.48
RAB43Q86YS6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB43Q86YS6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.02■□□□□ 0.48
RAB43Q86YS6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB43Q86YS6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RAB43Q86YS6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
RAB43Q86YS6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAB43Q86YS6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB43Q86YS6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 HCG11-201ENST00000411553 5696 ntBASIC18.01■□□□□ 0.47
RAB43Q86YS6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 AC007663.1-201ENST00000438948 1240 ntBASIC18.01■□□□□ 0.47
RAB43Q86YS6 CA15P1-201ENST00000481698 905 ntBASIC18.01■□□□□ 0.47
RAB43Q86YS6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB43Q86YS6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RAB43Q86YS6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 AC099778.1-201ENST00000568593 1911 ntBASIC18■□□□□ 0.47
RAB43Q86YS6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18■□□□□ 0.47
RAB43Q86YS6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18■□□□□ 0.47
RAB43Q86YS6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18■□□□□ 0.47
RAB43Q86YS6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RAB43Q86YS6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RAB43Q86YS6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB43Q86YS6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18■□□□□ 0.47
RAB43Q86YS6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18■□□□□ 0.47
RAB43Q86YS6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms