Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PACS2Q86VP3 AC022211.2-201ENST00000585075 2527 ntBASIC18.98■□□□□ 0.63
PACS2Q86VP3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS2Q86VP3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 CDV3P1-201ENST00000471403 739 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 AC083906.2-201ENST00000511578 360 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 AF201337.1-201ENST00000520239 748 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 AC133552.2-202ENST00000575694 574 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 AC108860.2-201ENST00000562760 2183 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PACS2Q86VP3 GNAS-203ENST00000306120 1878 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS2Q86VP3 HTR7P1-202ENST00000624664 4411 ntBASIC18.97■□□□□ 0.63
PACS2Q86VP3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 HLA-L-209ENST00000420110 1011 ntBASIC18.96■□□□□ 0.63
PACS2Q86VP3 AL109923.1-201ENST00000618799 583 ntBASIC18.96■□□□□ 0.63
PACS2Q86VP3 AL050303.2-201ENST00000619798 666 ntBASIC18.96■□□□□ 0.63
PACS2Q86VP3 OR10C1-204ENST00000622521 1039 ntBASIC18.96■□□□□ 0.63
PACS2Q86VP3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PACS2Q86VP3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS2Q86VP3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS2Q86VP3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PACS2Q86VP3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PACS2Q86VP3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PACS2Q86VP3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS2Q86VP3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PACS2Q86VP3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms