Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 AL390719.1-204ENST00000412397 1219 ntBASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 AC120498.8-201ENST00000614275 531 ntBASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 AC006333.2-201ENST00000607957 2099 ntBASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDZRN4Q6ZMN7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 AC006557.6-201ENST00000623071 864 ntBASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDZRN4Q6ZMN7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.64■■□□□ 1.06
PDZRN4Q6ZMN7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDZRN4Q6ZMN7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PDZRN4Q6ZMN7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PDZRN4Q6ZMN7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDZRN4Q6ZMN7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDZRN4Q6ZMN7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN4Q6ZMN7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN4Q6ZMN7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDZRN4Q6ZMN7 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.64■■□□□ 1.05
PDZRN4Q6ZMN7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN4Q6ZMN7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms