Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT40Q6A162 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT40Q6A162 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT40Q6A162 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KRT40Q6A162 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.88■■□□□ 1.09
KRT40Q6A162 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
KRT40Q6A162 AC005521.1-201ENST00000393351 872 ntBASIC21.88■■□□□ 1.09
KRT40Q6A162 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT40Q6A162 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.88■■□□□ 1.09
KRT40Q6A162 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 AL512353.2-201ENST00000448759 1962 ntBASIC21.88■■□□□ 1.09
KRT40Q6A162 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.88■■□□□ 1.09
KRT40Q6A162 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT40Q6A162 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.87■■□□□ 1.09
KRT40Q6A162 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT40Q6A162 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT40Q6A162 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
KRT40Q6A162 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
KRT40Q6A162 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.87■■□□□ 1.09
KRT40Q6A162 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT40Q6A162 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT40Q6A162 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT40Q6A162 AC083906.6-201ENST00000641366 219 ntBASIC21.87■■□□□ 1.09
KRT40Q6A162 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT40Q6A162 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
KRT40Q6A162 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 KRT8P9-201ENST00000558927 1449 ntBASIC21.87■■□□□ 1.09
KRT40Q6A162 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT40Q6A162 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KRT40Q6A162 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
KRT40Q6A162 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
KRT40Q6A162 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
KRT40Q6A162 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT40Q6A162 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
KRT40Q6A162 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
KRT40Q6A162 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
KRT40Q6A162 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.86■■□□□ 1.09
KRT40Q6A162 KRT18P57-201ENST00000443599 1254 ntBASIC21.86■■□□□ 1.09
KRT40Q6A162 FAM207BP-201ENST00000447172 505 ntBASIC21.86■■□□□ 1.09
KRT40Q6A162 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
KRT40Q6A162 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.86■■□□□ 1.09
KRT40Q6A162 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.86■■□□□ 1.09
KRT40Q6A162 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT40Q6A162 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.86■■□□□ 1.09
KRT40Q6A162 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT40Q6A162 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KRT40Q6A162 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 FSCN1P1-201ENST00000568912 1481 ntBASIC21.85■■□□□ 1.09
KRT40Q6A162 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT40Q6A162 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT40Q6A162 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT40Q6A162 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT40Q6A162 CKBP1-201ENST00000565489 1086 ntBASIC21.85■■□□□ 1.09
KRT40Q6A162 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.85■■□□□ 1.09
KRT40Q6A162 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.85■■□□□ 1.09
KRT40Q6A162 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT40Q6A162 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT40Q6A162 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT40Q6A162 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT40Q6A162 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms