Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 INGX-202ENST00000489074 768 ntBASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 AC092902.6-201ENST00000641783 218 ntBASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL13A1Q5TAT6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 AC080038.3-201ENST00000623346 1952 ntBASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 AC093520.2-201ENST00000561830 333 ntBASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 PDPK2P-202ENST00000562415 1191 ntBASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 AC073592.5-201ENST00000624854 528 ntBASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.23■□□□□ 0.99
COL13A1Q5TAT6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 MIR661-201ENST00000384842 89 ntBASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 AL023284.2-201ENST00000405850 579 ntBASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 MIR3180-5-201ENST00000583743 153 ntBASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.22■□□□□ 0.99
COL13A1Q5TAT6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 AC093214.1-201ENST00000511688 1107 ntBASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL13A1Q5TAT6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 TFAMP1-201ENST00000412727 736 ntBASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 CR383656.12-201ENST00000549567 513 ntBASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms