Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 TSPY21P-201ENST00000433481 731 ntBASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC00242Q5T6M2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 AF201337.1-201ENST00000520239 748 ntBASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 AC105036.2-201ENST00000569468 176 ntBASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms