Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 FAM197Y1-201ENST00000421178 764 ntBASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 AL353807.1-201ENST00000427475 662 ntBASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 AL158047.1-201ENST00000445918 881 ntBASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 AC011298.2-201ENST00000617989 482 ntBASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 AL031985.4-201ENST00000642138 673 ntBASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ATP13A4Q4VNC1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 MESTP1-201ENST00000404287 994 ntBASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP13A4Q4VNC1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 GCSHP5-201ENST00000443090 522 ntBASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ATP13A4Q4VNC1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP13A4Q4VNC1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms