Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFEMP1Q12805 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFEMP1Q12805 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFEMP1Q12805 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFEMP1Q12805 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFEMP1Q12805 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.64■□□□□ 0.73
EFEMP1Q12805 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 AK4P3-201ENST00000418260 669 ntBASIC19.64■□□□□ 0.73
EFEMP1Q12805 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 COX11P1-201ENST00000489116 835 ntBASIC19.64■□□□□ 0.73
EFEMP1Q12805 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 CR769767.2-201ENST00000622735 460 ntBASIC19.64■□□□□ 0.73
EFEMP1Q12805 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFEMP1Q12805 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.64■□□□□ 0.73
EFEMP1Q12805 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 AC009947.2-201ENST00000444014 672 ntBASIC19.63■□□□□ 0.73
EFEMP1Q12805 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFEMP1Q12805 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.63■□□□□ 0.73
EFEMP1Q12805 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
EFEMP1Q12805 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 MCCD1P1-208ENST00000445732 328 ntBASIC19.62■□□□□ 0.73
EFEMP1Q12805 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 YBX1P2-201ENST00000489612 999 ntBASIC19.62■□□□□ 0.73
EFEMP1Q12805 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.62■□□□□ 0.73
EFEMP1Q12805 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
EFEMP1Q12805 AL023973.1-201ENST00000624619 620 ntBASIC19.62■□□□□ 0.73
EFEMP1Q12805 AL512353.2-201ENST00000448759 1962 ntBASIC19.62■□□□□ 0.73
EFEMP1Q12805 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.62■□□□□ 0.73
EFEMP1Q12805 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFEMP1Q12805 AC036111.1-201ENST00000533973 1582 ntBASIC19.61■□□□□ 0.73
EFEMP1Q12805 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 AL161938.1-201ENST00000569833 2180 ntBASIC19.61■□□□□ 0.73
EFEMP1Q12805 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
EFEMP1Q12805 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFEMP1Q12805 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms