Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 AC012313.1-201ENST00000593393 3059 ntBASIC17.69■□□□□ 0.42
RPS3AP61247 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RPS3AP61247 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 AC090340.1-201ENST00000620778 4980 ntBASIC17.69■□□□□ 0.42
RPS3AP61247 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS3AP61247 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 AC009113.1-201ENST00000570267 2443 ntBASIC17.68■□□□□ 0.42
RPS3AP61247 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.68■□□□□ 0.42
RPS3AP61247 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RPS3AP61247 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RPS3AP61247 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS3AP61247 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RPS3AP61247 YBX1P10-201ENST00000444752 975 ntBASIC17.68■□□□□ 0.42
RPS3AP61247 RPS2P4-201ENST00000476944 856 ntBASIC17.68■□□□□ 0.42
RPS3AP61247 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS3AP61247 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 RARRES2P10-201ENST00000564312 460 ntBASIC17.68■□□□□ 0.42
RPS3AP61247 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
RPS3AP61247 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RPS3AP61247 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS3AP61247 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS3AP61247 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS3AP61247 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RPS3AP61247 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RPS3AP61247 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 AL139384.1-201ENST00000612143 3047 ntBASIC17.67■□□□□ 0.42
RPS3AP61247 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RPS3AP61247 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 AC068880.1-201ENST00000507289 2297 ntBASIC17.67■□□□□ 0.42
RPS3AP61247 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS3AP61247 AL353807.1-201ENST00000427475 662 ntBASIC17.67■□□□□ 0.42
RPS3AP61247 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.67■□□□□ 0.42
RPS3AP61247 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
RPS3AP61247 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS3AP61247 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPS3AP61247 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS3AP61247 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.67■□□□□ 0.42
RPS3AP61247 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS3AP61247 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS3AP61247 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS3AP61247 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPS3AP61247 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RPS3AP61247 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms