Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.88■□□□□ 0.77
ERVFC1P60507 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.88■□□□□ 0.77
ERVFC1P60507 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.88■□□□□ 0.77
ERVFC1P60507 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERVFC1P60507 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERVFC1P60507 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERVFC1P60507 AC104390.1-201ENST00000555663 520 ntBASIC19.88■□□□□ 0.77
ERVFC1P60507 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.88■□□□□ 0.77
ERVFC1P60507 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERVFC1P60507 AC005332.3-201ENST00000589904 676 ntBASIC19.88■□□□□ 0.77
ERVFC1P60507 AC010240.3-201ENST00000607688 395 ntBASIC19.88■□□□□ 0.77
ERVFC1P60507 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ERVFC1P60507 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.88■□□□□ 0.77
ERVFC1P60507 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ERVFC1P60507 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERVFC1P60507 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.87■□□□□ 0.77
ERVFC1P60507 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ERVFC1P60507 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.87■□□□□ 0.77
ERVFC1P60507 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.87■□□□□ 0.77
ERVFC1P60507 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.87■□□□□ 0.77
ERVFC1P60507 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.87■□□□□ 0.77
ERVFC1P60507 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERVFC1P60507 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.86■□□□□ 0.77
ERVFC1P60507 AL512353.2-201ENST00000448759 1962 ntBASIC19.86■□□□□ 0.77
ERVFC1P60507 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.86■□□□□ 0.77
ERVFC1P60507 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.86■□□□□ 0.77
ERVFC1P60507 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.86■□□□□ 0.77
ERVFC1P60507 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.86■□□□□ 0.77
ERVFC1P60507 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.86■□□□□ 0.77
ERVFC1P60507 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ERVFC1P60507 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.86■□□□□ 0.77
ERVFC1P60507 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.86■□□□□ 0.77
ERVFC1P60507 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERVFC1P60507 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
ERVFC1P60507 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.86■□□□□ 0.77
ERVFC1P60507 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ERVFC1P60507 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.85■□□□□ 0.77
ERVFC1P60507 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.85■□□□□ 0.77
ERVFC1P60507 LINC01006-201ENST00000333319 2292 ntBASIC19.85■□□□□ 0.77
ERVFC1P60507 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.85■□□□□ 0.77
ERVFC1P60507 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ERVFC1P60507 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.85■□□□□ 0.77
ERVFC1P60507 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.85■□□□□ 0.77
ERVFC1P60507 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERVFC1P60507 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ERVFC1P60507 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
ERVFC1P60507 HOXB1-202ENST00000577092 1414 ntBASIC19.85■□□□□ 0.77
ERVFC1P60507 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.85■□□□□ 0.77
ERVFC1P60507 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.84■□□□□ 0.77
ERVFC1P60507 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 Z82202.1-201ENST00000623446 1880 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
ERVFC1P60507 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 AL022342.1-201ENST00000400363 863 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ERVFC1P60507 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.84■□□□□ 0.77
ERVFC1P60507 AP003733.1-201ENST00000491725 852 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 AC104819.1-201ENST00000504587 486 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.84■□□□□ 0.77
ERVFC1P60507 LINC01711-201ENST00000598340 967 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 AL390719.2-201ENST00000606993 987 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 IGHV3-41-201ENST00000613121 348 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.84■□□□□ 0.77
ERVFC1P60507 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms