Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 AC005332.7-201ENST00000614046 2005 ntBASIC14.09□□□□□ -0.15
CMC4P56277 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CMC4P56277 AC087499.1-201ENST00000418141 1075 ntBASIC14.09□□□□□ -0.15
CMC4P56277 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.09□□□□□ -0.15
CMC4P56277 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CMC4P56277 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.09□□□□□ -0.15
CMC4P56277 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.09□□□□□ -0.15
CMC4P56277 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 AFG3L1P-217ENST00000557444 2447 ntBASIC14.09□□□□□ -0.15
CMC4P56277 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.09□□□□□ -0.15
CMC4P56277 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CMC4P56277 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CMC4P56277 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.08□□□□□ -0.15
CMC4P56277 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CMC4P56277 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.08□□□□□ -0.15
CMC4P56277 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CMC4P56277 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.08□□□□□ -0.15
CMC4P56277 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CMC4P56277 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CMC4P56277 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CMC4P56277 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.08□□□□□ -0.16
CMC4P56277 HMGA1P5-201ENST00000412453 271 ntBASIC14.08□□□□□ -0.16
CMC4P56277 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.08□□□□□ -0.16
CMC4P56277 LIN28AP1-201ENST00000429574 405 ntBASIC14.08□□□□□ -0.16
CMC4P56277 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.08□□□□□ -0.16
CMC4P56277 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.08□□□□□ -0.16
CMC4P56277 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.08□□□□□ -0.16
CMC4P56277 AC145285.6-201ENST00000604632 637 ntBASIC14.08□□□□□ -0.16
CMC4P56277 AL023803.3-201ENST00000615559 522 ntBASIC14.08□□□□□ -0.16
CMC4P56277 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CMC4P56277 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CMC4P56277 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CMC4P56277 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMC4P56277 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.07□□□□□ -0.16
CMC4P56277 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 AP000523.1-201ENST00000398242 1049 ntBASIC14.07□□□□□ -0.16
CMC4P56277 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 AL390955.1-201ENST00000428694 934 ntBASIC14.07□□□□□ -0.16
CMC4P56277 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.07□□□□□ -0.16
CMC4P56277 AC133561.5-201ENST00000635547 218 ntBASIC14.07□□□□□ -0.16
CMC4P56277 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
CMC4P56277 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.07□□□□□ -0.16
CMC4P56277 PKD1P1-201ENST00000458669 6805 ntBASIC14.07□□□□□ -0.16
CMC4P56277 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.07□□□□□ -0.16
CMC4P56277 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMC4P56277 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.06□□□□□ -0.16
CMC4P56277 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms