Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH11P55287 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH11P55287 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CDH11P55287 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH11P55287 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDH11P55287 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH11P55287 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH11P55287 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH11P55287 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH11P55287 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH11P55287 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH11P55287 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH11P55287 HTR7P1-202ENST00000624664 4411 ntBASIC17.32■□□□□ 0.36
CDH11P55287 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH11P55287 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH11P55287 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH11P55287 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH11P55287 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH11P55287 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 PRKY-204ENST00000533551 1019 ntBASIC17.31■□□□□ 0.36
CDH11P55287 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH11P55287 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH11P55287 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH11P55287 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH11P55287 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH11P55287 SDHAP1-207ENST00000440850 2000 ntBASIC17.31■□□□□ 0.36
CDH11P55287 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH11P55287 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH11P55287 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH11P55287 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH11P55287 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH11P55287 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDH11P55287 AC018470.1-201ENST00000624790 3129 ntBASIC17.3■□□□□ 0.36
CDH11P55287 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH11P55287 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH11P55287 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDH11P55287 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDH11P55287 KRASP1-201ENST00000407852 552 ntBASIC17.3■□□□□ 0.36
CDH11P55287 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH11P55287 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH11P55287 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH11P55287 AC124016.1-201ENST00000609552 612 ntBASIC17.3■□□□□ 0.36
CDH11P55287 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDH11P55287 AC104417.2-201ENST00000562989 1793 ntBASIC17.3■□□□□ 0.36
CDH11P55287 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH11P55287 AL512353.2-201ENST00000448759 1962 ntBASIC17.29■□□□□ 0.36
CDH11P55287 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDH11P55287 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms