Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LIMK2P53671 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.06■□□□□ 0.64
LIMK2P53671 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 AC012306.2-201ENST00000609350 630 ntBASIC19.06■□□□□ 0.64
LIMK2P53671 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.06■□□□□ 0.64
LIMK2P53671 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
LIMK2P53671 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LIMK2P53671 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LIMK2P53671 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LIMK2P53671 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LIMK2P53671 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.05■□□□□ 0.64
LIMK2P53671 NUDT16P1-203ENST00000513809 620 ntBASIC19.05■□□□□ 0.64
LIMK2P53671 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.05■□□□□ 0.64
LIMK2P53671 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LIMK2P53671 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.05■□□□□ 0.64
LIMK2P53671 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.05■□□□□ 0.64
LIMK2P53671 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LIMK2P53671 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.05■□□□□ 0.64
LIMK2P53671 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.05■□□□□ 0.64
LIMK2P53671 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIMK2P53671 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LIMK2P53671 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LIMK2P53671 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LIMK2P53671 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.04■□□□□ 0.64
LIMK2P53671 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 MMP23A-201ENST00000234610 1017 ntBASIC19.04■□□□□ 0.64
LIMK2P53671 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
LIMK2P53671 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
LIMK2P53671 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.04■□□□□ 0.64
LIMK2P53671 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
LIMK2P53671 AC083906.6-201ENST00000641366 219 ntBASIC19.04■□□□□ 0.64
LIMK2P53671 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.04■□□□□ 0.64
LIMK2P53671 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
LIMK2P53671 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LIMK2P53671 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.04■□□□□ 0.64
LIMK2P53671 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.04■□□□□ 0.64
LIMK2P53671 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIMK2P53671 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
LIMK2P53671 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LIMK2P53671 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.03■□□□□ 0.64
LIMK2P53671 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 AC090164.3-201ENST00000610780 2143 ntBASIC19.03■□□□□ 0.64
LIMK2P53671 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LIMK2P53671 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LIMK2P53671 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.03■□□□□ 0.64
LIMK2P53671 TSPY21P-201ENST00000433481 731 ntBASIC19.03■□□□□ 0.64
LIMK2P53671 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 KRT18P21-201ENST00000515767 1272 ntBASIC19.03■□□□□ 0.64
LIMK2P53671 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.03■□□□□ 0.64
LIMK2P53671 C1QL1P1-201ENST00000568105 661 ntBASIC19.03■□□□□ 0.64
LIMK2P53671 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.03■□□□□ 0.64
LIMK2P53671 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.03■□□□□ 0.64
LIMK2P53671 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms